[phenixbb] Phenix.refine question

Mark Saper saper at umich.edu
Fri Mar 18 13:11:13 PDT 2022


Really bizarre.  The experts will have more info, I hope.  When you model the Tyr in the posiive density, is the geometry satisfactory (including main-chain)?  If so, then you might try turning off real space refinement and see what happens.  Check the occupancies of the Tyr also.

Mark A. Saper, Ph.D.
Associate Professor Emeritus of Biological Chemistry
University of Michigan Medical School
saper at umich.edu  |  +1 734 276 6505

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