[phenixbb] CaBLAM fixing and interpretation in comprehensive validation for cryo-EM

Ahmad Khalifa underoath006 at gmail.com
Wed Jun 26 11:20:12 PDT 2019


I would appreciate some insights on how to interpret the validation results
under the CaBLAM tab and how to use it to fix my structure in Coot?

What are the CaBLAM score, the Ca geometry score, the helix score and the
3-10 score?

How to use the information under the secondary structure tab? In my protein
for example, I see a lot of "try beta sheets", should I try to refine that
segment using beta sheets restraints?

Best regards.
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