[phenixbb] d99 resolution measure availability?

Ricardo Righetto ricardorighetto at gmail.com
Sat May 26 12:35:18 PDT 2018

Dear Oli,

The d99 criterion is available in the phenix.mtriage program.

Best wishes,

Ricardo Diogo Righetto

2018-05-26 20:44 GMT+02:00 Oliver Clarke <olibclarke at gmail.com>:

> Hi,
> I think the “d99” criterion described in this preprint (
> https://www.biorxiv.org/content/early/2018/03/14/279844) looks like a
> really interesting FSC-independent way to measure res in real space, and
> I’d like to give it a go on my maps (particularly those where I am
> suspicious of the FSC-based res based on map appearance, or where I suspect
> overfitting).
> Is it available in any phenix package at present? The scripts site
> mentioned in the preprint (http://phenix-online.org/
> phenix_data/afonine/cryoem_validation/) is currently rather sparsely
> populated.
> (Also, I wonder whether a directional version of the d99 criterion might
> be useful to estimate anisotropic res in the case of a preferred
> orientation, analogous to the 3D-FSC approach of Yong-Zi Tan and Dmitry
> Lyumkis?)
> Cheers
> Oli
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