[phenixbb] .hhr files?

Jan Abendroth jan.abendroth at gmail.com
Fri Sep 1 09:38:00 PDT 2017

hi Pat,
I think it is under the tab 'raw output', then download.


On Fri, Sep 1, 2017 at 9:32 AM, Patrick Loll <pjloll at gmail.com> wrote:

> This feels like a silly question, but I’ve already wasted some time
> head-banging, so here goes:
> I would like to generate a .hhr sequence alignment file for use in
> MR-Rosetta. After running HHPRED, I get a lovely alignment, but I see no
> place to save it as a .hhr file. Several “how-to” pages talk about a “save”
> button above the alignment, but the MPI bioinformatics pages seem to have
> been reformatted in the past few months, and I see no such button. There is
> a tab labeled “raw output” with a download option, but that appears to give
> a FASTA format.
> So…can anyone suggest a way forward? Either by capturing the elusive .hhr
> file, or by saving the data in some other format that is still useful for
> MR-Rosetta?
> Thanks,
> Pat
> ------------------------------------------------------------
> ---------------------------
> Patrick J. Loll, Ph. D.
> Professor of Biochemistry & Molecular Biology
> Drexel University College of Medicine
> Room 10-102 New College Building
> 245 N. 15th St., Mailstop 497
> Philadelphia, PA  19102-1192  USA
> (215) 762-7706
> pjloll at gmail.com
> pjl28 at drexel.edu
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Jan Abendroth
Emerald Biostructures
Seattle / Bainbridge Island, WA, USA
home: Jan.Abendroth_at_gmail.com
work: JAbendroth_at_embios.com
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