[phenixbb] question related to phenix produced PDB file

Smith Liu smith_liu123 at 163.com
Sat Mar 21 19:53:22 PDT 2015

Dear Pavel,
Is it the degree for the addition of the errors of all the atoms in the PDB file? I just think 42.3 degree is a rather large amount, either for the whole protein, or for the part of the whole protein? For this reason I double the reliability of my refinement. And why there is no RMS phase error?
I am looking forward to getting a reply from you.

At 2015-03-22 00:16:35, "Pavel Afonine" <pafonine at lbl.gov> wrote:
Hello Dialing,


It says "DEGREES".


On 3/21/15 5:35 AM, Dialing Pretty wrote:

Dear All,
In my Phenix refine produced PDB file, I find in REMARK 3, there is a sentence "PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED): 42.3. Does 42.3 means 42.3%? Is it too high?
I am looking forward to getting your reply.

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