[phenixbb] Autobuild Density

Pavel Afonine pafonine at lbl.gov
Thu Jun 18 09:16:45 PDT 2015

Hi Appu,

a guess: perhaps you are comparing density modified map (from AutoBuild) 
with 2mFo-DFc map (from phenix.refine). If that's the case the maps are 
going to look differently indeed, so it's not too unexpected.


On 6/18/15 08:47, Appu kumar wrote:
> Dear All,
> I have query about the density map from autobuild. The density map 
> from the autobuild look exceptionally good at 3.8A resolution. But 
> when i refined the autobuild pdb against the original mtz file, the 
> density become worse. Is it i am doing something wrong or i have to 
> use some parameterization? Structure is solved with the MR.
> Appu

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