[phenixbb] resolve phases/fom

Terwilliger, Thomas Charles terwilliger at lanl.gov
Sat Jan 24 07:03:17 PST 2015

Hi Oliver,

Yes, the FOM for denmod_1.mtz etc would be the values you are looking for.  They aren't echoed in the log files, that is true.  I find the R-factor for density modification (above 0.4 not very good, below 0.3 great) a more useful indicator of how well density modification has proceeded and it is copied to the log files (and used in decision-making) instead.

All the best,
Tom T

From: phenixbb-bounces at phenix-online.org [phenixbb-bounces at phenix-online.org] on behalf of "Weiergräber, Oliver H." [o.h.weiergraeber at fz-juelich.de]
Sent: Saturday, January 24, 2015 2:28 AM
To: phenixbb at phenix-online.org
Subject: [phenixbb] resolve phases/fom


while compiling phasing stats for a manuscript, I came around the following question:
Having run autosol (on a SAD dataset) from the command line, where to find the latest density-modified phases (with associated FOMs) _before_ the onset of model building?
The PHIM and FOMM columns in the denmod_i.mtz files are obvious candidates - just want to be sure since this particular FOM does not seem to be echoed in the log files, as far as I can see.

Best regards

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