[phenixbb] Rosetta MR mmcif file subprocess failed

Nigel Moriarty nwmoriarty at lbl.gov
Mon Jan 12 09:35:58 PST 2015


It, I believe, is a misleading message from the data file reader. It's
basically found an empty file. Are all of the files you supplied non-empty?
If not, the MR-Rosetta is creating an empty file. Can we have the input
files? Send them directly, not to the list.



NB. Any files sent to me will be held in strictest confidence.

Nigel W. Moriarty
Building 64R0246B, Physical Biosciences Division
Lawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709     Email : NWMoriarty at LBL.gov
Fax   : 510-486-5909       Web  : CCI.LBL.gov

On Mon, Jan 12, 2015 at 9:25 AM, Christian Roth <
christian.roth at bbz.uni-leipzig.de> wrote:

> Hi phenix developers,
> I started a Rosetta MR run with a model pdb and the target sequence file.
> It seems that the initial MR run went fine and the Rebuilding Job for the
> best MR solution started.
> A sequence alignment is shown in the log file and than the job stops
> suddenly with the message
> Sorry: mmcif file must contain at least one data block.
> I can't even find a mmcif file in one of the folders.
> Any idea what might went wrong.
> Thanks in advance for your help.
> Christian
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://phenix-online.org/mailman/listinfo/phenixbb
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20150112/31540886/attachment.htm>

More information about the phenixbb mailing list