[phenixbb] Starting structure as reference model - crashing in 1.10-2142

Pavel Afonine pafonine at lbl.gov
Wed Aug 26 21:42:24 PDT 2015

Hi Tristan,

could you please send me files (off list) and tell how to reproduce the 


On 8/26/15 20:30, Tristan Croll wrote:
> Hi,
> When I attempt to run a refinement in Phenix 1.10-2142 using the 
> starting structure as a reference model, it crashes with the complaint 
> that the reference (actually, the error states NCS - despite no NCS 
> being present or enabled. I guess internally it's using the same 
> code?) is too dissimilar to the model, and a calculated RMSD of >90 
> (degrees? I'm using torsion-angle restraints in any case). The same 
> settings work without complaint on the same structure in dev-2006. I'm 
> running from the GUI, checking "Reference model restraints" in the 
> main phenix.refine window, and then "use starting model as reference" 
> under "All parameters... Reference model restraints...".
> Thanks,
> Tristan

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