[phenixbb] idealizing structure

Kgosisejo, Oarabile o.kgosisejo at usask.ca
Mon Apr 27 12:57:41 PDT 2015


Is there only the command line version of this or the GUI usage is available as well?

Best Regards,

Oarabile Kgosisejo
From: phenixbb-bounces at phenix-online.org [phenixbb-bounces at phenix-online.org] on behalf of Pavel Afonine [pafonine at lbl.gov]
Sent: January 20, 2015 1:58 PM
To: PC; PHENIX list
Subject: Re: [phenixbb] idealizing structure

>   Is there a way to "idealize" a structure in Phenix?
> I mean, ideal omega, all residues within allowed regions of Ramachandran maps, no clashes..etc. I know it won't fit the map well but I would like to see what it looks like.

Yes, using phenix.geometry_minimization :



phenixbb mailing list
phenixbb at phenix-online.org

More information about the phenixbb mailing list