[phenixbb] Fo-Fc omit map for ligand in the protein-ligand structure

Nathaniel Echols nechols at lbl.gov
Sun Sep 14 14:36:03 PDT 2014

On Sun, Sep 14, 2014 at 2:31 PM, Wei Shi <wei.shi118 at gmail.com> wrote:

> For standard omit map, do you mean using Phenix-> Maps -> Composite omit
> map. And omit map method: Anneal and map types: 2mFo-DFc. Thank you so much!

All I meant by "standard" was "omit ligand, leave bulk solvent calculation
alone".  It doesn't need to be a composite omit map - what you were doing
originally using phenix.refine was sufficient (if unnecessarily slow), and
this is exactly what reviewers (or P.I.s) tend to ask for.

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20140914/554f25f8/attachment.htm>

More information about the phenixbb mailing list