[phenixbb] Maximum-likelihood score calculation

Nathaniel Echols nechols at lbl.gov
Fri Jul 11 17:07:52 PDT 2014

On Fri, Jul 11, 2014 at 4:57 PM, Pavel Afonine <pafonine at lbl.gov> wrote:

> 1) ML targets used in phenix.refine and Phaser are essentially the same
> but parametrized differently (alpha/beta vs sigmaA).

... but they are not reported the same way - phenix.refine shows a raw
target value (normalized?), while Phaser outputs TFZ and LLG.  Presumably
these are related somehow but it is not obvious to me.

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