[phenixbb] Phenix.refine with Ir

Nigel Moriarty nwmoriarty at lbl.gov
Fri Aug 15 16:32:38 PDT 2014

You can provide the attached file to phenix.refine to remove the error.

On Fri, Aug 15, 2014 at 5:18 AM, Chen Zhao <c.zhao at yale.edu> wrote:

> Dear all,
> I am sorry for bothering you with this dumb question, but it occurs to me
> that phenix cannot refine a model with Ir, giving the error message of
> atoms with unknown nonbonded energy type symbols. Since this is my first
> time really working on the refinement, I have no clue of how to fix it.
> Would anybody give me a hint?
> Thanks a lot in advance!
> Sincerely,
> Chen
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> phenixbb at phenix-online.org
> http://phenix-online.org/mailman/listinfo/phenixbb

Nigel W. Moriarty
Building 64R0246B, Physical Biosciences Division
Lawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709     Email : NWMoriarty at LBL.gov
Fax   : 510-486-5909       Web  : CCI.LBL.gov
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