[phenixbb] zero B-factors

Pavel Afonine pafonine at lbl.gov
Fri Nov 15 22:23:20 PST 2013

Hi Edna,

are you using the latest version of Phenix, which is:


If not, please try it and see if it solves the problem.

Alternatively, you can send me the model and data files, and I will have 
a look. This might be the most efficient option. If you decide to do so 
please send the files to my email directly (not the whole mailing list).


On 11/15/13 9:37 PM, Edna Patricia Matta, Ms wrote:
> Hello,
> Recently I did submit a structure to the PDB but they found that some
> atoms had zero value for the B-factors.
> I am new in this filed and I do not know what to do. There have been
> reports of problems with some versions of phenix about this. I used
> Phenix 1.8.
> I repeted the refinement doing restrain NCS-related B-factors but I do
> not find where to check for the the B-factor values in the the log file.
> Somebody can help me?
> Thanks a lot,
> Edna
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