[phenixbb] GUI display items

Machius, Mischa Christian mischa_machius at med.unc.edu
Sat Mar 9 05:08:10 PST 2013


I don't know how difficult the following would be to implement in your current system, so forgive me if it's too ambitious:
Ideally, the user would be able to choose what to display. I am thinking of a column info system along the lines of iTunes where one can select which data should be shown (right-click on any column header). One should also be able to sort on any column (ascending/descending).

Things to show would include (nut are not limited to):
R, Rfree, Rfree-R, variation of LLG and R factors in the last cycle compared to penultimate cycle (to test for convergence), Ramachandran outliers, rotamer outliers, clash score, input weights, LLG, map correlation coefficients, etc., all the goodies :)


On Mar 6, 2013, at 3:13 PM, Nathaniel Echols <nechols at lbl.gov>

> On Wed, Mar 6, 2013 at 2:18 AM, Luca Pellegrini <lp212 at cam.ac.uk> wrote:
>> Is there a way to change/select the column items displayed in the PHENIX home window, under the 'Job history' tab? At the moment, mine shows: ID/Program/Date/Job title or directory/R-free. I would like to add things like the Overall score from MolProbity etc. I looked under Preferences but couldn't find anything.
> This isn't possible right now, but since you are the second person to
> ask, I guess I should bump it higher up on my to-do list.  You would
> not be able to show the MolProbity score for existing jobs in any
> case, because it is not stored centrally, but I will add that and the
> clashscore now.  Are there any other statistics that should be visible
> from this interface?  (I think I have FOM and LLG for AutoSol and
> Phaser jobs already.)
> Also note that you can edit the title for a finished run, which might
> help a bit in the interim.
> -Nat
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