[phenixbb] Phenix "hangs" on a Mac?

Joseph Noel noel at salk.edu
Mon Jul 22 14:13:14 PDT 2013

Has anyone had a problem when using Phenix refine through the GUI on a Mac wherein the program after hitting Run locally starts but then hangs without proceeding? Seems to happen to me about one out of five times I run refine and always hangs when I experiment with ramachandran restraints for only a portion of the polypeptide chain. I've tried letting things alone for several hours and nothing happens. I can abort and then often resubmit and it then runs fine (except for rama restraints). I've found this happens with both nightly builds and stable releases. I am currently running the latest nightly build 1439.
Joseph P. Noel, Ph.D.
Arthur and Julie Woodrow Chair
Investigator, Howard Hughes Medical Institute
Professor, The Jack H. Skirball Center for Chemical Biology and Proteomics
The Salk Institute for Biological Studies
10010 North Torrey Pines Road
La Jolla, CA  92037 USA

Phone: (858) 453-4100 extension 1442
Cell: (858) 349-4700
Fax: (858) 597-0855
E-mail: noel at salk.edu

Publications & Citations: http://scholar.google.com/citations?user=xiL1lscAAAAJ

Homepage Salk: http://www.salk.edu/faculty/noel.html
Homepage HHMI: http://hhmi.org/research/investigators/noel.html

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