[phenixbb] mr_rosetta and disulphide bonds

Morten Groftehauge mortengroftehauge.work at gmail.com
Mon Jan 7 09:16:26 PST 2013

Doh! I was looking in the manual for the release version, not the one for
the dev-version. My face is red.

With regard to the test failure am I right in thinking that it's probably
not much of a problem?


On 7 January 2013 17:08, Nathaniel Echols <nechols at lbl.gov> wrote:

> On Mon, Jan 7, 2013 at 6:11 AM, Morten Groftehauge
> <mortengroftehauge.work at gmail.com> wrote:
> > I forgot my important question in all my "this seems to be working but
> the
> > test says it doesn't"-drama:
> > How do I specify disulphide bonds for MR_rosetta? I know it keeps them if
> > they are in the input model but disulphides are generally poorly
> conserved,
> > especially in the %identity range where mr_rosetta is the most useful.
> > According to the changelog this feature should be available in the latest
> > dev.
> Maybe something like this?
> https://www.phenix-online.org/version_docs/dev-1263/mr_rosetta.htm#anch57
> -Nat
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Morten K Grøftehauge, PhD
Pohl Group
Durham University
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