[phenixbb] autobuild omit map as Fo-Fc

Ursula Schulze-Gahmen uschulze-gahmen at lbl.gov
Wed Mar 7 12:12:05 PST 2012

I calculated an omit-map for my model using the following command inpt:

phenix.autobuild data=HKL2000+R.mtz model=ptefb_A4_refine_43.pdb
omit_region_specification=omit_around_pdb omit_box_pdb_list=G_chain.pdb
composite_omit_type=refine_omit maps_only=true

I would like to display a 2Fo-Fc and Fo-Fc map but I cannot find the

overall_best_refine_map_coeffs.mtz output file that should have these
coefficients according to the manual. I only see the
overall_best_denmod_map_coeffs.mtz file.

Can somebody tell how to best get to an omit Fo-Fc or 2Fo-Fc map?



Ursula Schulze-Gahmen, Ph.D.
Assistant Researcher
UC Berkeley, QB3
356 Stanley Hall #3220
Berkeley, CA 94720-3220
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20120307/964bf99f/attachment.htm>

More information about the phenixbb mailing list