[phenixbb] SA-OMIT map/omit regions

Qiang Chen chen at red.dfci.harvard.edu
Mon Mar 5 09:03:22 PST 2012

HI all,

I want to use phenix.autobuild to calculate SA-OMIT map. BY default, it
will be seperated into 16 regions. How could I  set a different number of
omit regions? Is there any difference of the final omit map by setting
different regions?

The phenix.autobuild manual says:
If you are calculating an omit map, then use nproc=5 * number of omit
regions (i.e., up to 100 or more, depending on how many processors you
have). Does the * mean to use regions number to multiply 5?

If my computer have 16 processors and I want to use 48 regions, so my
command should be this: nproc=240.  Am I right?

Thank you!

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