[phenixbb] GUI parameter files

Leonid Sazanov sazanov at mrc-mbu.cam.ac.uk
Mon Mar 19 13:47:00 PDT 2012


I downloaded dev-1005 version and in Graphics window there is no Sec.Str.?


It's messy - click "Graphics" on the toolbar, then "Sec. Str." on the
toolbar of the graphics window, which will open the editor for these
restraints.  I will make this more accessible ASAP, and I'll add a
menu option to simply wipe out the current definitions.

Dr. Leonid A. Sazanov
Research group leader
Medical Research Council
Mitochondrial Biology Unit
Wellcome Trust / MRC Building
Hills Road
WEB: www.mrc-mbu.cam.ac.uk
Tel: +44-1223-252910
Fax: +44-1223-252915

On 15/03/2012 19:29, Leonid Sazanov wrote:
> Hi, I have a following problem in dev-874 version:
> If I restore a previous job in refine GUI, to run it with modified 
> settings, and include a new parameter file .eff with definitinon of 
> secondary structure restrains, these new restrains are combined with 
> previously used restrains.
> How do i get rid of previous restrains? Older file is not visible in 
> inputs, but its settings are still used.
> And in general, how can one be sure which parameters are used at the 
> start of each refine run?
> If older settings loaded from .eff or .param file are not visible, the 
> only way is to look through new .eff file, which takes a lot of time.
> Has this been solved in latest builds perhaps?
> Thank you,
> Leo

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