[phenixbb] runtime error in phenix.refine

Pavel Afonine pafonine at lbl.gov
Mon Jun 11 12:05:44 PDT 2012

Hi Eugene,

if you send me the necessary inputs (off-list) I'll try to reproduce the 
problem and see what generates it ...


  On 6/11/12 11:44 AM, Nathaniel Echols wrote:
> On Sun, Jun 10, 2012 at 10:04 AM, Eugene Valkov<eugene.valkov at gmail.com>  wrote:
>> I'm encountering the following during the second macro-cycle in
>> phenix.refine in latest 1.8-1069 dev build for Linux 64-bit:
>> RuntimeError: Excessive number of cubicles:
>>   This may be due to unreasonable parameters:
>>     cubicle_edge=5
>>     space_span=(8467.78,8440.85,8372.67)
>>     n_cubicles=(1694,1689,1675)
>>     max_number_of_bytes=101542821888
>> Any thoughts/suggestions much appreciated.
> If I'm interpreting the code correctly, this means that the number of
> cubicles will lead to an integer format overflow - which I find hard
> to believe if you're using a 64-bit system.  Could you please send me
> the rest of the error message, along with the output of the command
> "boost_adaptbx.show_platform_info"?
> thanks,
> Nat
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