[phenixbb] Real_space_refinement at low resolution question

Pavel Afonine pafonine at lbl.gov
Fri Jan 20 05:37:36 PST 2012

> Dear phenix users,
> I was wondering if it could be correct to exclude the
> real_space_refinement step working with a 3.3 A resolution map: I noted
> that in every real_space_refinemet step phenix told me that it was not
> useful. How can I exclude the routine from the command line?
> I am using 1.7.3-928 version.

phenix.refine tries it and if it finds it wasn't useful it steps back to 
previous state, meaning you don't need to do anything.
Alternatively, simply remove "individual_sites_real_space" from 
"strategy", which may help to run phenix.refine a bit faster.


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