[phenixbb] phenix.validate ? Or RSCC from command line?

Pavel Afonine pafonine at lbl.gov
Mon Jun 20 10:49:48 PDT 2011

Hi Francis,

phenix.model_vs_data model.pdb data.mtz comprehensive=true

will give you map CC computed per residue or per atom (depending on 
resolution). Also, it will list 2mFo-DFc and mFo-DFc map values per atom 
or per residue.

More info:

Additionally there is a more general tool 
(phenix.real_space_correlation) which gives more fine controls, but I 
guess phenix.model_vs_data should be just enough.


On 6/20/11 10:21 AM, Francis E Reyes wrote:
> Phenixers
> Is there a great phenix cmd line utility that computes a real space 
> correlation for each residue given model and data?  I'll take a .py if 
> necessary.
> Thanks!

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