[phenixbb] no density on the anchored proteins

zhangh1 at umbc.edu zhangh1 at umbc.edu
Thu Jun 2 09:16:43 PDT 2011


I am using phenix.refine to calculate the map of the 50S RNA (1FFK). It is
weird that there is no density on the anchored proteins even for the Fc
map. Following is the code I am using:

phenix.refine ${f}.pdb ${f}.mtz main.number_of_macro_cycles=0
xray_data.high_resolution=${res} xray_data.r_free_flags.generate=True

Thanks for any advice!


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