[phenixbb] phenix.phaser PATH problem

Ralf Grosse-Kunstleve rwgrosse-kunstleve at lbl.gov
Wed Jul 20 13:35:28 PDT 2011

Hopefully, all you need to do is source phenix_env last.
E.g. look in your .cshrc or .bashrc file with the phenix and ccp4 source
Reorder the commands so that phenix comes after the ccp4 command.
Then open a new shell and run "phenix.phaser params.eff" again.
Could you try that?
(I recommend against copying files from the phenix to the ccp4 tree.)

On Wed, Jul 20, 2011 at 11:21 AM, G P <gysubscribe at gmail.com> wrote:

> Dear all,
> It's long story:
> At beginning, I have phenix installed. I do not have CCP4 installed. Then I
> run "phenix.phaser params.eff" to call phenix run phaser from script
> params.eff. It works well.
> Then, I installed CCP4 with its own phaser inside. Then I run again
> "phenix.phaser params.eff". The computer start to import files (should be
> some libraries and supporting files, not input data) from CCP4 installation
> directory. It seems so strange for me.
> And because some of the .so files in CCP4 directory are for 32bit,
> phenix.phaser gave me error message: wrong ELF class: ELFCLASS32 and refused
> to keep running. I guess I could solve this problem by copying the same .so
> file in phenix directory into CCP4's directory.
> What I really want to know is why this happen. Is that the installation of
> CCP4 changed some kinds of PATH variables for phenix? How could I fix by
> giving a right path again?
> I would appreciate to any help. Thanks a lot guys!
> Best regards,
> GP
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> phenixbb at phenix-online.org
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