[phenixbb] on residue bond deviation

Dialing Pretty hdc123hdc123 at yahoo.com
Tue Dec 13 16:28:18 PST 2011

Dear All,

After a key step refinement byPhenix refine, I find there are 2 residues (total about 450 residues) with bad angles as analyzed by MolProity (deviation ratio 0.46%, goal is 0.1% ), both of the 2 residues are Pro, and both of the deviation angles are C-N-CA.

Will you please give the comment on what do the 2 deviations mentioned above mean for my whole protein structure, or should I continue to refine my protein structure?

I am looking forward to getting your reply.

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