[phenixbb] autoMR wizard

Randy Read rjr27 at cam.ac.uk
Tue Dec 6 08:03:30 PST 2011

On the face of it, I can't understand why they should be different, if that's the same data and information you used for CCP4.  For simple MR, the older version in CCP4 should be pretty much the same as the newer version in Phenix.

Were there any logfiles that you could send to me (preferably off-line)?



On 3 Dec 2011, at 18:10, Vitali Stanevich wrote:

> Hi,
> I'm trying to solve structure by molecular replacement. We already have structure for this protein and new is exactly the same thing with a ligand soaked. I can solve it without a problem with ccp4 gui (tfz=47.7), but not with phenix.automr, which is disappointing. Can somebody point me out what's wrong with my data input? I did it with this command:
>  phenix.automr output.sca complex_search.pdb identity=90 mass=93500 copies=1
> or with .eff file (attached)
> Thanks, 
> Vitali
> <my_automr.eff>_______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://phenix-online.org/mailman/listinfo/phenixbb

Randy J. Read
Department of Haematology, University of Cambridge
Cambridge Institute for Medical Research      Tel: + 44 1223 336500
Wellcome Trust/MRC Building                   Fax: + 44 1223 336827
Hills Road                                    E-mail: rjr27 at cam.ac.uk
Cambridge CB2 0XY, U.K.                       www-structmed.cimr.cam.ac.uk

More information about the phenixbb mailing list