[phenixbb] H related bond deviaion
hdc123hdc123 at yahoo.com
Tue Dec 6 03:49:06 PST 2011
I did a Phenix refine, and before the refine all the H were added. MolProbity analysis demonstrated that almost everything are acceptable after the refinement.
However when I did the geometry analysis by the COOT validation, I find all the residues having a significant deviation bond involving H. with z score higher than 7.
I am looking forward to getting an explanation from you on it,including how to avoid it.
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