[phenixbb] FYI : autobuild : "refine_pdb_in.mtz is missing" etc.

Lepore, Bryan Bryan.Lepore at umassmed.edu
Wed Sep 22 08:37:24 PDT 2010

here's a google-able post of a *solved problem* for the archive :

phenix 1.6.4-486 (latest official release as of 21sep2010)
building ends (FINISHED) with error messages (see below).

some associated job setup details :
phenix.autobuild with CL flag refine_eff_file_list=my_refinement_params.eff
cartesian or torsion annealing, or start_temperature work OK in building/refinement.
two segid's in .pdb, one chain id

SOLUTION : use the latest build. i used phenix-dev-533 GNU/Linux 32-bit.

and thanks especially to Tom Terwilliger for the solution.

[key error messages]:

Failed to carry out AutoBuild_multiple_models:
Sorry a subprocess has failed...
Failed to carry out AutoBuild_build_cycle:
Sorry...the file AutoBuild_run_1_/TEMP0/refine_pdb_in.mtz is missing...

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