[phenixbb] molprobity todo list and coot integration in linux

Nathaniel Echols NEchols at lbl.gov
Tue Mar 9 07:43:37 PST 2010

On Mar 9, 2010, at 10:34 AM, hari jayaram wrote:
> Hi,
> Is a difference in the way the GUI molprobity TODO list is displayed between linux and Mac OSX . I am running 1.6.289 on both ...and have coot with scheme and python scripting installed,
> On mac OSX , phenix starts up coot with the molecule and maps loaded after a phenix.validate and a TO-DO list in a separate GUI window 
> In Linux these separate To-do list windows dont seem to open . ..I have looked everywhere and the dont seem burried behind something else,
> Is there some setting I need to toggle to have these popup , sortable todo lists for molprobity assisted rebuilding on Linux systems?

Preferences::Graphics::Show validation results in Coot GUI

FYI, I mostly stopped working on this after I figured out how to recenter Coot from PHENIX, so it only includes the results from the "Model validation" tab - however, I'm happy to extend this to include the geometry and real-space CC analyses if people would find this useful.

Nathaniel Echols
Lawrence Berkeley Lab
NEchols at lbl.gov

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