[phenixbb] simulated annealing
nechols at lbl.gov
Sat Jun 19 09:56:17 PDT 2010
On Sat, Jun 19, 2010 at 9:41 AM, jp d <yoyoq at yahoo.com> wrote:
> sorry it was included with ccp4, (not phenix, my mistake)
> i tried to send it but hit the size limit with the attachment
I received the rejection notice from the server, so I have the file now.
As Ralf already explained, the simulated annealing temperature is far too
high - if I leave the default settings alone (
it seems to work without any errors. With a temperature of 550,000K, I'd
guess that the protein is being turned into plasma. Therefore, the error
message is both intentional and appropriate, although the formatting is a
little misleading (it looks too much like a bug). Perhaps we need to set an
internal temperature limit too?
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