[phenixbb] writing composite omit maps in .xplor

Susan Tsutakawa setsutakawa at lbl.gov
Tue Jun 1 13:45:57 PDT 2010

Great. Thank you for implementing it.

Sent from phone. Please excuse if email is too terse.

On Jun 1, 2010, at 11:45 AM, Nathaniel Echols <NEchols at lbl.gov> wrote:

> On Sat, May 29, 2010 at 2:27 PM, Susan Tsutakawa  
> <setsutakawa at lbl.gov> wrote:
> Continuing the conversation on looking at Phenix maps in pymol, what  
> is the best way to generate .xplor maps in Autobuild.  I would like  
> to generate a figure in pymol with an omit map.   I wasn't able to  
> find documentation explicitly stating how this can be done.
> Okay, starting tomorrow (or whenever the next installer is ready):
> phenix.mtz2map resolve_composite_map.mtz
> You can specify a PDB file if you want it to create the map around  
> your molecule (or a selection thereof) instead of the unit cell.  It  
> is tailored for RESOLVE and phenix.refine map coefficients, which  
> have fairly well-defined column labels; others should work too, but  
> it may be clumsier.
> -Nat
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