[phenixbb] Bad selections in phenix.refine

Nathaniel Echols nechols at lbl.gov
Mon Jul 12 17:15:40 PDT 2010

> On Sun, Jul 11, 2010 at 5:36 PM, Mark A Saper <saper at umich.edu> wrote:
>> When running phenix.refine from the GUI, definitions for rigid body groups
>> in phenix.refine that are syntactically wrong, causes the job to just hang
>> with "running" status but no CPU is used.  It would be nice if either the
>> GUI checked for valid selections, or if phenix.refine returned an
>> appropriate error code that would be recognized by the GUI.
> Actually, the latter is exactly what should happen - the only reason why it
> wouldn't is if you've stumbled across a low-level C++ error that can't be
> propagated.  I already modified the code to handle one such error a couple
> of months ago (it should be in 1.6.2) but there may be others I don't know
> about.

Okay, after a quick experiment, it seems that this is almost exactly what
was happening.  Next build will have the fix.

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