[phenixbb] Reflection count

Pavel Afonine PAfonine at lbl.gov
Wed Oct 7 17:20:57 PDT 2009

Hi Lucas,

the reflection output by "export_final_f_model" option may be truncated 
by the resolution, sigma etc (if you used those criteria). Also, 
phenix.refine does automatic detection and removing of outliers, so that 
file will not contain them too.

Using your original files or *_data.mtz generated by phenix.refine is 
much better option.

Also, it depends how you count Fobs(+) and Fobs(-) (if you have any).


On 10/7/09 5:15 PM, Lucas Bleicher wrote:
> I have been working in a pseudo-merohedrally twinned for some time, and I have finally refined the structure to a good model. By the time I was still struggling with it, I have noticed that there was a discrepancy between the reflection count in the mtz file and the one reported in the PDB, but since I stopped working on it for some months I forgot the issue, which was pointed by RCSB staff when I deposited the data.
> The mtz file generated by phenix.refine using the export_final_f_model=mtz
> option has 47331 reflections according to mtzdump. However, the "DATAPDB file generated 
>       ____________________________________________________________________________________
> Veja quais são os assuntos do momento no Yahoo! +Buscados
> http://br.maisbuscados.yahoo.com
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://www.phenix-online.org/mailman/listinfo/phenixbb

More information about the phenixbb mailing list