[phenixbb] Carbohydrate refinement

Katya Heldwein katya.heldwein at tufts.edu
Tue May 12 11:22:11 PDT 2009


I have several N-linked sugars in my structure. Some are modeled as 
single NAGs and others, as NAG-NAG chains.

How do I specify Asn-NAG and NAG-NAG linkages for phenix refinement? 
Currently, when I try to refine the model, NAGs move away from Asn and 
from each other.



Ekaterina Heldwein, Ph.D.

Assistant Professor

Department of Molecular Biology and Microbiology

Tufts University School of Medicine

136 Harrison Ave

Boston, MA 02111


phone: 617-636-0858

fax: 617-636-0337

e-mail: katya.heldwein at tufts.edu

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