[phenixbb] phasine error

Pavel Afonine PAfonine at lbl.gov
Wed Jun 10 21:18:47 PDT 2009


you can get it using phenix.refine. Just type from the command line:

phenix.refine model.pdb data.mtz strategy=none main.number_of_macro_cycles=1

and hit Enter. Look for the numbers towards the end of log file or 
output to the screen (after bulk solvent correction and scaling is 
reported done).

Please let me know if you have any questions.


PS> It is a good question, thanks. I will add phase error and ML 
coordinate error estimates to model_vs_data.

On 6/10/09 9:10 PM, vennila Natesan wrote:
> Dear members
> I am having solved strcutures for some five datasets of the same 
> protein. All the cases autobuild
> builds ~97% of residues. I want to compare the phasing among those. 
> Can we calculate the phasing
> error in the units of degrees in autosol? In all the cases, the 
> Bayesian CC is between 45 and 56 and FOM
> is between 0.42 and 0.47.Is <http://0.47.Is> there any option in 
> phenix to know the phasing error in degrees?
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