[phenixbb] refine with experimental phases

Pavel Afonine pafonine at lbl.gov
Thu Jan 29 08:22:10 PST 2009

Hi Phil,

> Are the experimental phases now included in the map coefficients? 

Yes, this map is computed by default if input data file contains HL 

The map coefficients file contains both, regular maps (2FOFCWT_no_fill 
and FOFCWT_no_fill) and the maps computed using modified set of Fobs 
(missing Fobs are substituted with <Fobs>; 2FOFCWT and FOFCWT). If HL 
are present then all these maps are phase-combined.

> If  
> so, with what weight? 

What you mean by weight?

> Are there parameters affecting this?



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