[phenixbb] Problem starting TLS refinement

Ralf W. Grosse-Kunstleve rwgk at cci.lbl.gov
Fri May 16 11:12:13 PDT 2008

Hi Andrzej,

This may be due to an empty atom selection, although it should be
caught at an earlier stage.
I think this doesn't do what you expect:

      tls = "(chain A and resid 030:060)"

The problem are the leading zeros. Could you try removing all leading
zeros in the resid range selections?
You can check your atom selections like this:

  phenix.pdb_atom_selection your.pdb "(chain A and resid 30:60)"

This will give you the list of selected atoms.


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