[phenixbb] tlsanal

Pavel Afonine PAfonine at lbl.gov
Tue Jul 1 15:22:21 PDT 2008

Hi John,

there are currently no specific tools in PHENIX to do this. I know some 
people use TLSview set of tools:


although I'm not sure if it accepts phenix.refine style of TLS 
selections, so you may need to re-format them.


On 6/30/2008 9:43 PM, john kryst wrote:
> Hi all !!
> I have coupls of questions regarding TLS in phenix.
> 1. Has anyone tried using program tlsviewer with phenix refined pdb. 
> It is not able to detect TLS groups unless you modify your residue 
> range in the pdb to refmac convention. Is there any other program 
> available to visualize the TLS movements.
> 2. I would like to use tlsanal to see how much is the contibution from 
> TLS to the ADP. Is there any utility availble in TLS to do it. If i 
> need to use tlsanal.. what should i modify in the pdb.
> thanks
> regards
> John
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