[phenixbb] problem finding large no of sites in high symmetry

Banumathi Sankaran BSankaran at lbl.gov
Thu Nov 8 12:04:49 PST 2007

Hi Ralf,

Thanks for the mail. Actually I did not wait till the hyss to finish, as it took longer time I try to interupt . I tried with lower number of sites still it did run for longer time.  I will try with randon seed now. The data is not that great. It is actually expected from this particular crystal and it always had low resolution limit. If not successful with randon seed I will send you the data set. 


----- Original Message -----
From: "Ralf W. Grosse-Kunstleve" <rwgk at cci.lbl.gov>
Date: Wednesday, November 7, 2007 1:36 pm
Subject: Re: [phenixbb] problem finding large no of sites in high symmetry
To: phenixbb at phenix-online.org

> Hi Banu,
> did hyss finish without giving you consensus model?
> P23 is the worst space group for the fast-translation function.
> hyss may run for an unusually long time.
> The runtime warning is harmless.
> If you don't get outstanding correlations in one run of hyss, it
> may be worth running multiple jobs with different random seeds.
> I've also observed that the resolution cutoff can be very critical.
> If you point me to the data, I could run some jobs.
> Ralf
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